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Phylogenomics of weevils revisited: data curation and modelling compositional heterogeneity
Li, Yan-Da1,2; Engel, Michael S.3; Tihelka, Erik2; Cai, Chenyang1,2
2023-09-20
发表期刊BIOLOGY LETTERS
ISSN1744-9561
卷号19期号:9页码:8
摘要

Weevils represent one of the most prolific radiations of beetles and the most diverse group of herbivores on land. The phylogeny of weevils (Curculionoidea) has received extensive attention, and a largely satisfactory framework for their interfamilial relationships has been established. However, a recent phylogenomic study of Curculionoidea based on anchored hybrid enrichment (AHE) data yielded an abnormal placement for the family Belidae (strongly supported as sister to Nemonychidae + Anthribidae). Here we reanalyse the genome-scale AHE data for Curculionoidea using various models of molecular evolution and data filtering methods to mitigate anticipated systematic errors and reduce compositional heterogeneity. When analysed with the infinite mixture model CAT-GTR or using appropriately filtered datasets, Belidae are always recovered as sister to the clade (Attelabidae, (Caridae, (Brentidae, Curculionidae))), which is congruent with studies based on morphology and other sources of molecular data. Although the relationships of the 'higher Curculionidae' remain challenging to resolve, we provide a consistent and robust backbone phylogeny of weevils. Our extensive analyses emphasize the significance of data curation and modelling across-site compositional heterogeneity in phylogenomic studies.

关键词Curculionoidea Belidae phylogeny compositional heterogeneity
DOI10.1098/rsbl.2023.0307
收录类别SCI
语种英语
关键词[WOS]ANCHORED HYBRID ENRICHMENT ; COLEOPTERA CURCULIONOIDEA ; MAXIMUM-LIKELIHOOD ; EVOLUTION ; TREE ; PHYLOGENETICS ; SYSTEMATICS ; ALIGNMENTS ; SELECTION ; INSIGHTS
资助项目Strategic Priority Research Program of the Chinese Academy of Sciences[XDB26000000] ; National Natural Science Foundation of China[42222201] ; National Natural Science Foundation of China[42288201] ; China Scholarship Council[202108320010]
WOS研究方向Life Sciences & Biomedicine - Other Topics ; Environmental Sciences & Ecology ; Evolutionary Biology
WOS类目Biology ; Ecology ; Evolutionary Biology
WOS记录号WOS:001163660400001
项目资助者Strategic Priority Research Program of the Chinese Academy of Sciences ; National Natural Science Foundation of China ; China Scholarship Council
出版者ROYAL SOC
文献类型期刊论文
条目标识符http://ir.nigpas.ac.cn/handle/332004/43383
专题中国科学院南京地质古生物研究所
通讯作者Cai, Chenyang
作者单位1.Chinese Acad Sci, State Key Lab Palaeobiol & Stratig, Nanjing Inst Geol & Palaeontol, Nanjing 210008, Peoples R China
2.Univ Bristol, Sch Earth Sci, Bristol Palaeobiol Grp, Life Sci Bldg,Tyndall Ave, Bristol BS8 1TQ, Avon, England
3.Amer Museum Nat Hist, Div Invertebrate Zool, Cent Pk West & 79th St, New York, NY 10024 USA
推荐引用方式
GB/T 7714
Li, Yan-Da,Engel, Michael S.,Tihelka, Erik,et al. Phylogenomics of weevils revisited: data curation and modelling compositional heterogeneity[J]. BIOLOGY LETTERS,2023,19(9):8.
APA Li, Yan-Da,Engel, Michael S.,Tihelka, Erik,&Cai, Chenyang.(2023).Phylogenomics of weevils revisited: data curation and modelling compositional heterogeneity.BIOLOGY LETTERS,19(9),8.
MLA Li, Yan-Da,et al."Phylogenomics of weevils revisited: data curation and modelling compositional heterogeneity".BIOLOGY LETTERS 19.9(2023):8.
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